CDS

Accession Number TCMCG034C36628
gbkey CDS
Protein Id XP_028950925.1
Location join(4546458..4546490,4546797..4546859,4546957..4547274,4547367..4547558,4547885..4547958,4548178..4548247,4549800..4549852,4549973..4550030,4550110..4550477,4550583..4550655,4550823..4550921,4551055..4551123,4551203..4551280,4551469..4551555,4551652..4551686,4551800..4551905,4552562..4552642,4552745..4552837,4552938..4552991,4553060..4553176,4553303..4553401,4554176..4554223,4554304..4554396,4555024..4555131,4555210..4555274,4555380..4555482,4555652..4555954,4556068..4556070)
Gene LOC103400121
GeneID 103400121
Organism Malus domestica

Protein

Length 980aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA534520
db_source XM_029095092.1
Definition pre-mRNA-processing protein 40A-like isoform X3 [Malus domestica]

EGGNOG-MAPPER Annotation

COG_category A
Description pre-mRNA-processing protein 40A-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12821        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005685        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070064        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAATAACCCTCAATCCTCAGCTGCGCAGCCATTTCGGCTTCCCCCAGTTGCTCCCATGGGTCCTCAGAGTTTTGGTTCATCTCCTCTTCAATACCGACCAGTGGTTCCAACACAGCAAGGACAGCAATTTATTTCACCAGCTCCCCAACAATTTCAGCCTGTGGGACAAGGTATTCCTTCTCCAAATGTTGGGATGCCTGCTAGTCAAAGTCAGCAATTACAATATTCTCAACCAATGCAACCGTATCCTCTCAGGCCAAGTCAGCCTGGTCATCCTCACTCGTCACAGGCGTTGCCTATGCAATACATGCAAACGAGGCCTATTACATCTATCCCATCACAGTCTCAGCAACCTGTCCCACCTTTTAATAACCAAATGCCTGGAATGCCTTATTCTTCCTCATATGTGTTCACTCCGCCTACGTATGCCCAGCCACAAAATAATGTCAATTCACAGTTTCAGCCGATGTCTCAAATGCAAGCACATGTTGTATCTGCTACAGGACAGCCTTGGGTGTCCTCTGGTAATCAGGGTGTAGCAGTTCCTTTTCCAGTACAGCAGTCTAGCCAACAATCTTCAAGCACTCCTTCCACAGATTCTGCTGTAAATGTTTCTAGCCAAGCACAGCAATCTTCTTCGGATTGGCAAGAGCATTTGGCGGTTGATGGAAGAAGATATTATTTCAACAGAAGGACAAGACAATCTAATTGGGAGAAGCCTTTAGAATTGATGACACCGATGGAGAGGGCTGATGCATCAACTGTTTGGAAGGAGTATACATCTGCAGATGGGAAAAAGTATTATTACAACAAGGTTACAAGGGAGTCTAAGTGGACAATTCCAGAGGAGTTGAAGTTGGCTCGTGAACAGGCTCAAAGAGAACTAATCCAAGGAACACATTCAGAATTGAATTTGACTTCTCATACCCCTCCTGCTGTTGCTTCAGCTGAAACACCTATGGGAGCTAGTTCAGTTGGCCCCAGCACTTCTTCAGCCCTACCTGTGATGGTCTCGAGCCCTGTTGCAGTTACACCTGTGTCTTCCTTTTCTAATCCTTCTGCTATCACACCTACTGGATCATCAGTTGCTTCTGGTGCACAGCCTTCCATAACTGGTGCCGTTGGCAGTCAACCTTCTGCAGTTACTGTGAGTCCACTGCCCGCTTCTGTTTCAGGGAGTTCCGGAGTTCCTCCTACTTCGGTCAATACCACTACAAATTCACTGAGTACTTATGAAACTGTAGCATCTCAAGATATTTCAAGTTCAGCTGATGGAACTTTGACTCAAGATATTGAGGAAGCCAAAAGAGGTATGGCAGTTGCTGGAAAAGTCAATGTGACTCCTTCAGAGGAGAAAACATTTGATGACGAACCATTGGTGTATGCCAATAAGCAGGAGGCAAAAACTGCATTCAAATCACTTCTGGAATCTGCAAATGTTCAGTCCGATTGGACTTGGGAGCAGACAATGAGGGAGATCATTACTGACAAAAGATATGGCGCATTAAGAACTCTAGGTGAGAGGAAGCAAGCATTTAATGAGTACTTGGGTCAAAGGAAAAAACTGGAGAATGAAGAGAGGCGCGTGAGGCAGAAAAAAGCTCGGGAAGAATTCACAAAAATGTTGGAAGAGTCCAAGGAACTTACATCAGCAACTAAATGGAGCAAAGCTGTGAGTATGTTTGAAAATGATGGACGATTCAAGGCTGTAGAAAGAGGTAGAGACCAGGAAGATCTTTATGAGAGCTACATTGTAGAACTCGAAAGGAAGGAAAAAGAAAAGGCAGCTGAAGACCATAAGCAGAATATAGTAGAGTACCGGAAATTTCTGGAATCTTGTGACTTTATCAAGGTGAACAGTCAGTGGCGGAAAGTTCAAGATCGCTTGGAGGATGATGAGAGATGCTTGCGCCTTGAAAAGCTTGCCAGGTTGCTCATTTTCCAGGACTATATTCGTGACCTCGAGAAGGTGGAAGAGGAGCAAAAGAAGTTACAGAAGGAACAATTGAGGCGGGTAGAAAGGAAAAACCGCGATGAGTTCCGCAAGCTGATGGAAGAACATGTTGCCGATGGCACTCTTACAGCTAAAACTCTCTGGCGTGATTACTGTTTGAAGGTTAAAGACTTGCCTCCTTATGAAGCTGTTGCATTGAACACCTCTGGTTCAACACCAAAAGAATTGTTTGATGATGTTTTTGAAGAATTAGAGAAACAGTATCATGACGATAAAGCTAGGATAAAGGATGCAATGAAGTCAGGGAAGGTTGCCATGGCATCCACATTGGCGTTTGAAGAGTTTAAGGTTCCTATTCTGGAAGAAATTGGTTCTCCACCAATATCAGACATTAACTTCAAGCTTGTGTACGAGGAATTATTAGAGAGAGCCAAGGAGAAGGAGGAGAAAGAGGCAAAGAAGCGTCAACGACTTGCTGATGATTTCAATAAACTTTTGCACACAATCAAGGAGATAACGGCTTCTTCTAATTGGGAAGATAGCAAACAGCTTTTTGAAGAAACCCAAGAATACAGATCAATTGGGGAAGATAGCGTTAGTAGGGAAATTTTTGAGGAATACATTACAAACTTACAGGAGAGGGCTAAAGAGAAGGAACGCAAGCGTGAGGAGGAAAAGGCCAAAAAAGAGAGAGAAAGAGAGGAGAAAGAGAAGCGGAAGGATAAAGAAAGAAAGGAGAAGGAAAGAGAACGTGAAAAAGAAAAGGGAAGGGAACGATCTAAGAAGGATGAAACAGATAGTGAAAATGTAGACATAACTGATACTCATGGGCATAAAGAAGATAAGAAGAGGGAGAAAGACAAAGATAGAAAGCACCGGAAGCGGCATCAAAGTTCTGTCGATGATGTAGGTTCTGATAAGGAGGAGAAAGAGGAGTCTAAGAAACACAGACATAGTAGTGACCGCAAAAGATCAAGAAAATGA
Protein:  
MANNPQSSAAQPFRLPPVAPMGPQSFGSSPLQYRPVVPTQQGQQFISPAPQQFQPVGQGIPSPNVGMPASQSQQLQYSQPMQPYPLRPSQPGHPHSSQALPMQYMQTRPITSIPSQSQQPVPPFNNQMPGMPYSSSYVFTPPTYAQPQNNVNSQFQPMSQMQAHVVSATGQPWVSSGNQGVAVPFPVQQSSQQSSSTPSTDSAVNVSSQAQQSSSDWQEHLAVDGRRYYFNRRTRQSNWEKPLELMTPMERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKLAREQAQRELIQGTHSELNLTSHTPPAVASAETPMGASSVGPSTSSALPVMVSSPVAVTPVSSFSNPSAITPTGSSVASGAQPSITGAVGSQPSAVTVSPLPASVSGSSGVPPTSVNTTTNSLSTYETVASQDISSSADGTLTQDIEEAKRGMAVAGKVNVTPSEEKTFDDEPLVYANKQEAKTAFKSLLESANVQSDWTWEQTMREIITDKRYGALRTLGERKQAFNEYLGQRKKLENEERRVRQKKAREEFTKMLEESKELTSATKWSKAVSMFENDGRFKAVERGRDQEDLYESYIVELERKEKEKAAEDHKQNIVEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLARLLIFQDYIRDLEKVEEEQKKLQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTLWRDYCLKVKDLPPYEAVALNTSGSTPKELFDDVFEELEKQYHDDKARIKDAMKSGKVAMASTLAFEEFKVPILEEIGSPPISDINFKLVYEELLERAKEKEEKEAKKRQRLADDFNKLLHTIKEITASSNWEDSKQLFEETQEYRSIGEDSVSREIFEEYITNLQERAKEKERKREEEKAKKEREREEKEKRKDKERKEKEREREKEKGRERSKKDETDSENVDITDTHGHKEDKKREKDKDRKHRKRHQSSVDDVGSDKEEKEESKKHRHSSDRKRSRK